Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf1Q07802 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm44126-201ENSMUST00000204831 514 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm19994-201ENSMUST00000217086 586 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm270-201ENSMUST00000223010 976 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm21811-201ENSMUST00000096485 930 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.31□□□□□ -0.44
Ebf1Q07802 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.31□□□□□ -0.44
Ebf1Q07802 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.31□□□□□ -0.44
Ebf1Q07802 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.31□□□□□ -0.44
Ebf1Q07802 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ebf1Q07802 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf1Q07802 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf1Q07802 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.3□□□□□ -0.44
Ebf1Q07802 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.3□□□□□ -0.44
Ebf1Q07802 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Gm9022-201ENSMUST00000182482 992 ntBASIC12.3□□□□□ -0.44
Ebf1Q07802 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Mir7677-201ENSMUST00000184226 67 ntBASIC12.3□□□□□ -0.44
Ebf1Q07802 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms