Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a1Q05722 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC12.21□□□□□ -0.45
Col9a1Q05722 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC12.21□□□□□ -0.45
Col9a1Q05722 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.21□□□□□ -0.45
Col9a1Q05722 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a1Q05722 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a1Q05722 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col9a1Q05722 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a1Q05722 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Col9a1Q05722 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a1Q05722 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.21□□□□□ -0.46
Col9a1Q05722 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Col9a1Q05722 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm25076-201ENSMUST00000104098 132 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm9095-201ENSMUST00000117607 881 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm9097-201ENSMUST00000120514 880 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm15279-201ENSMUST00000155593 288 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm8018-201ENSMUST00000173536 789 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm26595-201ENSMUST00000181585 484 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm43547-201ENSMUST00000197729 328 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm43866-201ENSMUST00000203894 839 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm45094-201ENSMUST00000207013 617 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm18996-201ENSMUST00000214851 755 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm16380-201ENSMUST00000077997 478 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col9a1Q05722 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.2□□□□□ -0.46
Col9a1Q05722 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a1Q05722 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a1Q05722 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm8051-201ENSMUST00000120464 466 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm15815-201ENSMUST00000120569 255 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm15530-201ENSMUST00000122206 555 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm15258-201ENSMUST00000153801 741 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms