Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.96□□□□□ -0.5
Shox2P70390 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Shox2P70390 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shox2P70390 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.96□□□□□ -0.5
Shox2P70390 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.96□□□□□ -0.5
Shox2P70390 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shox2P70390 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.95□□□□□ -0.5
Shox2P70390 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.95□□□□□ -0.5
Shox2P70390 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.95□□□□□ -0.5
Shox2P70390 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.95□□□□□ -0.5
Shox2P70390 Gm13315-201ENSMUST00000120376 991 ntBASIC11.95□□□□□ -0.5
Shox2P70390 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.95□□□□□ -0.5
Shox2P70390 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.95□□□□□ -0.5
Shox2P70390 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.95□□□□□ -0.5
Shox2P70390 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.95□□□□□ -0.5
Shox2P70390 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.95□□□□□ -0.5
Shox2P70390 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Shox2P70390 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.95□□□□□ -0.5
Shox2P70390 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.95□□□□□ -0.5
Shox2P70390 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Shox2P70390 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.95□□□□□ -0.5
Shox2P70390 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shox2P70390 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shox2P70390 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Shox2P70390 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Gm6736-201ENSMUST00000166583 948 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Auts2-212ENSMUST00000178555 309 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shox2P70390 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shox2P70390 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Gm8000-201ENSMUST00000188378 592 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Gm44958-201ENSMUST00000203734 736 ntBASIC11.94□□□□□ -0.5
Shox2P70390 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.94□□□□□ -0.5
Shox2P70390 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shox2P70390 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.94□□□□□ -0.5
Shox2P70390 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms