Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Gm5616-201ENSMUST00000165252 384 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp5P56399 Gm8741-201ENSMUST00000174736 384 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Gm26461-201ENSMUST00000175064 290 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Usp5P56399 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.14□□□□□ -0.15
Usp5P56399 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp5P56399 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Gm22133-201ENSMUST00000102082 109 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp5P56399 Gm4909-201ENSMUST00000118749 794 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Gm15711-201ENSMUST00000118889 535 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Gm28071-201ENSMUST00000190355 478 ntBASIC14.13□□□□□ -0.15
Usp5P56399 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.13□□□□□ -0.15
Usp5P56399 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.13□□□□□ -0.15
Usp5P56399 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Gm5455-201ENSMUST00000058710 715 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp5P56399 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Usp5P56399 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.13□□□□□ -0.15
Usp5P56399 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp5P56399 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp5P56399 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.12□□□□□ -0.15
Usp5P56399 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Gm23949-201ENSMUST00000104027 127 ntBASIC14.12□□□□□ -0.15
Usp5P56399 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Gm12380-201ENSMUST00000119012 544 ntBASIC14.12□□□□□ -0.15
Usp5P56399 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms