Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.37□□□□□ -0.11
LtbrP50284 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.37□□□□□ -0.11
LtbrP50284 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LtbrP50284 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LtbrP50284 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LtbrP50284 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Gm12314-201ENSMUST00000118104 538 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.36□□□□□ -0.11
LtbrP50284 Gm4726-201ENSMUST00000135604 736 ntBASIC14.36□□□□□ -0.11
LtbrP50284 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.36□□□□□ -0.11
LtbrP50284 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.36□□□□□ -0.11
LtbrP50284 Gm6019-201ENSMUST00000148369 736 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Gm27910-201ENSMUST00000185004 107 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Gm37709-201ENSMUST00000195074 600 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Gm40332-201ENSMUST00000199847 938 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.36□□□□□ -0.11
LtbrP50284 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.36□□□□□ -0.11
LtbrP50284 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.36□□□□□ -0.11
LtbrP50284 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.36□□□□□ -0.11
LtbrP50284 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LtbrP50284 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LtbrP50284 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LtbrP50284 Gm13505-201ENSMUST00000121666 817 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.35□□□□□ -0.11
LtbrP50284 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Gm27530-201ENSMUST00000184096 98 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Gm5621-201ENSMUST00000187303 640 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Gm42937-201ENSMUST00000197360 752 ntBASIC14.35□□□□□ -0.11
LtbrP50284 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.35□□□□□ -0.11
LtbrP50284 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC14.35□□□□□ -0.11
LtbrP50284 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LtbrP50284 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LtbrP50284 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.35□□□□□ -0.11
LtbrP50284 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.35□□□□□ -0.11
LtbrP50284 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.35□□□□□ -0.11
LtbrP50284 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LtbrP50284 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LtbrP50284 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.34□□□□□ -0.11
LtbrP50284 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LtbrP50284 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms