Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.38□□□□□ -0.27
Brca1P48754 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gm22379-201ENSMUST00000157480 131 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Gm26368-201ENSMUST00000157826 118 ntBASIC13.38□□□□□ -0.27
Brca1P48754 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.38□□□□□ -0.27
Brca1P48754 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gm24809-201ENSMUST00000175318 271 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Mir6941-201ENSMUST00000184711 59 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Brca1P48754 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Brca1P48754 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Brca1P48754 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.38□□□□□ -0.27
Brca1P48754 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Brca1P48754 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Brca1P48754 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gm11560-201ENSMUST00000117567 948 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Brca1P48754 Gm9673-201ENSMUST00000119287 781 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.37□□□□□ -0.27
Brca1P48754 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Trav11n-201ENSMUST00000200113 343 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Gm43380-201ENSMUST00000200421 220 ntBASIC13.37□□□□□ -0.27
Brca1P48754 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Brca1P48754 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.37□□□□□ -0.27
Brca1P48754 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Brca1P48754 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Gm11500-201ENSMUST00000118237 601 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Gm12274-201ENSMUST00000120062 385 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Gm42430-201ENSMUST00000197209 616 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.36□□□□□ -0.27
Brca1P48754 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.36□□□□□ -0.27
Brca1P48754 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms