Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.5□□□□□ -0.41
HttP42859 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gm13284-201ENSMUST00000121020 547 ntBASIC12.5□□□□□ -0.41
HttP42859 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.5□□□□□ -0.41
HttP42859 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gm9372-201ENSMUST00000168454 430 ntBASIC12.5□□□□□ -0.41
HttP42859 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.5□□□□□ -0.41
HttP42859 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.5□□□□□ -0.41
HttP42859 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.5□□□□□ -0.41
HttP42859 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
HttP42859 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Gm23062-201ENSMUST00000102349 110 ntBASIC12.49□□□□□ -0.41
HttP42859 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Gm24992-201ENSMUST00000157412 130 ntBASIC12.49□□□□□ -0.41
HttP42859 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.49□□□□□ -0.41
HttP42859 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Gm11952-201ENSMUST00000121172 821 ntBASIC12.49□□□□□ -0.41
HttP42859 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
HttP42859 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HttP42859 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HttP42859 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HttP42859 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.49□□□□□ -0.41
HttP42859 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HttP42859 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HttP42859 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.48□□□□□ -0.41
HttP42859 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.48□□□□□ -0.41
HttP42859 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Gm6518-201ENSMUST00000208450 342 ntBASIC12.48□□□□□ -0.41
HttP42859 Gm18001-201ENSMUST00000212023 688 ntBASIC12.48□□□□□ -0.41
HttP42859 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.48□□□□□ -0.41
HttP42859 Gm5178-201ENSMUST00000219380 898 ntBASIC12.48□□□□□ -0.41
HttP42859 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HttP42859 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HttP42859 Gm4034-201ENSMUST00000187674 480 ntBASIC12.48□□□□□ -0.41
HttP42859 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.48□□□□□ -0.41
HttP42859 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HttP42859 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.48□□□□□ -0.41
HttP42859 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.48□□□□□ -0.41
HttP42859 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HttP42859 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.48□□□□□ -0.41
HttP42859 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms