Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm13350-201ENSMUST00000120519 479 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm7584-201ENSMUST00000175829 940 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm9136-201ENSMUST00000193368 454 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Pck2-205ENSMUST00000226352 2784 ntBASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-2P42586 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm13296-201ENSMUST00000117854 997 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm11511-201ENSMUST00000118146 540 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm13665-201ENSMUST00000120830 528 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm25668-201ENSMUST00000157700 129 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm5455-201ENSMUST00000058710 715 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.09□□□□□ -0.63
Nkx2-2P42586 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-2P42586 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
Nkx2-2P42586 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms