Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.42□□□□□ -0.42
Mmp13P33435 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Gm45930-201ENSMUST00000221330 292 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Mmp13P33435 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.42□□□□□ -0.42
Mmp13P33435 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp13P33435 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp13P33435 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm13342-201ENSMUST00000121055 207 ntBASIC12.41□□□□□ -0.42
Mmp13P33435 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm23119-201ENSMUST00000158610 140 ntBASIC12.41□□□□□ -0.42
Mmp13P33435 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm6334-201ENSMUST00000207083 228 ntBASIC12.41□□□□□ -0.42
Mmp13P33435 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.41□□□□□ -0.42
Mmp13P33435 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Mmp13P33435 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp13P33435 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.41□□□□□ -0.42
Mmp13P33435 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mmp13P33435 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp13P33435 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.4□□□□□ -0.42
Mmp13P33435 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Mmp13P33435 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.4□□□□□ -0.42
Mmp13P33435 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Mmp13P33435 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.4□□□□□ -0.42
Mmp13P33435 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.4□□□□□ -0.42
Mmp13P33435 Gm2991-201ENSMUST00000173338 480 ntBASIC12.4□□□□□ -0.42
Mmp13P33435 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms