Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm23931-201ENSMUST00000103842 109 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Gm24231-201ENSMUST00000104315 133 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.41□□□□□ -0.58
Clk1P22518 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.41□□□□□ -0.58
Clk1P22518 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Gm14760-201ENSMUST00000121831 999 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clk1P22518 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clk1P22518 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clk1P22518 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clk1P22518 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clk1P22518 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.4□□□□□ -0.58
Clk1P22518 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clk1P22518 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.4□□□□□ -0.58
Clk1P22518 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Gm44405-201ENSMUST00000198952 126 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.4□□□□□ -0.58
Clk1P22518 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.4□□□□□ -0.58
Clk1P22518 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.4□□□□□ -0.58
Clk1P22518 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.4□□□□□ -0.58
Clk1P22518 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clk1P22518 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Clk1P22518 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.4□□□□□ -0.59
Clk1P22518 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clk1P22518 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clk1P22518 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clk1P22518 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Clk1P22518 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.4□□□□□ -0.59
Clk1P22518 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Clk1P22518 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.39□□□□□ -0.59
Clk1P22518 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clk1P22518 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Gm14127-201ENSMUST00000117906 678 ntBASIC11.39□□□□□ -0.59
Clk1P22518 Gm12058-201ENSMUST00000118614 437 ntBASIC11.39□□□□□ -0.59
Clk1P22518 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clk1P22518 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms