Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.1□□□□□ -0.31
RaraP11416 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.1□□□□□ -0.31
RaraP11416 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Rprl1-201ENSMUST00000158050 327 ntBASIC13.1□□□□□ -0.31
RaraP11416 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.1□□□□□ -0.31
RaraP11416 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.1□□□□□ -0.31
RaraP11416 Gm2546-201ENSMUST00000182630 991 ntBASIC13.1□□□□□ -0.31
RaraP11416 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RaraP11416 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.1□□□□□ -0.31
RaraP11416 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RaraP11416 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RaraP11416 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RaraP11416 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RaraP11416 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RaraP11416 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.09□□□□□ -0.31
RaraP11416 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
RaraP11416 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Gm14247-201ENSMUST00000120950 237 ntBASIC13.09□□□□□ -0.31
RaraP11416 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RaraP11416 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Gm24845-201ENSMUST00000158034 109 ntBASIC13.09□□□□□ -0.31
RaraP11416 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.09□□□□□ -0.31
RaraP11416 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
RaraP11416 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.09□□□□□ -0.31
RaraP11416 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.09□□□□□ -0.31
RaraP11416 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.09□□□□□ -0.31
RaraP11416 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.09□□□□□ -0.31
RaraP11416 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.09□□□□□ -0.31
RaraP11416 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RaraP11416 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RaraP11416 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RaraP11416 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RaraP11416 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RaraP11416 Gm6023-201ENSMUST00000118217 606 ntBASIC13.08□□□□□ -0.32
RaraP11416 Gm11425-201ENSMUST00000119608 498 ntBASIC13.08□□□□□ -0.32
RaraP11416 Gm4986-201ENSMUST00000119731 549 ntBASIC13.08□□□□□ -0.32
RaraP11416 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms