Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm38266-201ENSMUST00000194931 421 ntBASIC12.31□□□□□ -0.44
PdgfrbP05622 Gm42599-201ENSMUST00000201308 469 ntBASIC12.31□□□□□ -0.44
PdgfrbP05622 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
PdgfrbP05622 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.31□□□□□ -0.44
PdgfrbP05622 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdgfrbP05622 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PdgfrbP05622 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Gm14726-201ENSMUST00000120623 896 ntBASIC12.3□□□□□ -0.44
PdgfrbP05622 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC12.3□□□□□ -0.44
PdgfrbP05622 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.3□□□□□ -0.44
PdgfrbP05622 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PdgfrbP05622 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.3□□□□□ -0.44
PdgfrbP05622 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.3□□□□□ -0.44
PdgfrbP05622 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.3□□□□□ -0.44
PdgfrbP05622 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdgfrbP05622 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm15198-201ENSMUST00000117283 177 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm14723-201ENSMUST00000118686 215 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Rprl1-201ENSMUST00000158050 327 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm21769-201ENSMUST00000211922 111 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms