Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.49□□□□□ -0.41
CopeO89079 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.49□□□□□ -0.41
CopeO89079 Gm23912-201ENSMUST00000104687 87 ntBASIC12.49□□□□□ -0.41
CopeO89079 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CopeO89079 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.49□□□□□ -0.41
CopeO89079 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.49□□□□□ -0.41
CopeO89079 Gm27839-201ENSMUST00000184242 106 ntBASIC12.49□□□□□ -0.41
CopeO89079 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.49□□□□□ -0.41
CopeO89079 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.49□□□□□ -0.41
CopeO89079 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.49□□□□□ -0.41
CopeO89079 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.49□□□□□ -0.41
CopeO89079 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopeO89079 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.48□□□□□ -0.41
CopeO89079 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.48□□□□□ -0.41
CopeO89079 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.48□□□□□ -0.41
CopeO89079 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.48□□□□□ -0.41
CopeO89079 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CopeO89079 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm13736-201ENSMUST00000119272 253 ntBASIC12.48□□□□□ -0.41
CopeO89079 Gm12138-201ENSMUST00000122180 951 ntBASIC12.48□□□□□ -0.41
CopeO89079 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm7561-201ENSMUST00000211203 886 ntBASIC12.48□□□□□ -0.41
CopeO89079 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.48□□□□□ -0.41
CopeO89079 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CopeO89079 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
CopeO89079 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CopeO89079 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.48□□□□□ -0.41
CopeO89079 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.48□□□□□ -0.41
CopeO89079 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CopeO89079 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CopeO89079 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.48□□□□□ -0.41
CopeO89079 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CopeO89079 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Gm13342-201ENSMUST00000121055 207 ntBASIC12.47□□□□□ -0.41
CopeO89079 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CopeO89079 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.47□□□□□ -0.41
CopeO89079 Gm8738-201ENSMUST00000172606 329 ntBASIC12.47□□□□□ -0.41
CopeO89079 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.47□□□□□ -0.41
CopeO89079 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.47□□□□□ -0.41
CopeO89079 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Gm39404-201ENSMUST00000216350 313 ntBASIC12.47□□□□□ -0.41
CopeO89079 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
CopeO89079 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms