Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.98□□□□□ -0.65
Rnf13O54965 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.98□□□□□ -0.65
Rnf13O54965 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Gm25927-201ENSMUST00000175058 117 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Gm29649-201ENSMUST00000185649 419 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Gm9794-201ENSMUST00000202370 423 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.98□□□□□ -0.65
Rnf13O54965 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Rnf13O54965 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Gm22058-201ENSMUST00000083393 310 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Gm6091-201ENSMUST00000098307 165 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.98□□□□□ -0.65
Rnf13O54965 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm12314-201ENSMUST00000118104 538 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rnf13O54965 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm44958-201ENSMUST00000203734 736 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Gm5904-201ENSMUST00000210286 865 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm10268-201ENSMUST00000085340 555 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.97□□□□□ -0.65
Rnf13O54965 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf13O54965 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf13O54965 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf13O54965 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rnf13O54965 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf13O54965 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf13O54965 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rnf13O54965 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf13O54965 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms