Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Polr1aO35134 Gm6322-201ENSMUST00000118789 1004 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Gm25545-201ENSMUST00000122673 323 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC18.32■□□□□ 0.52
Polr1aO35134 Gm7959-201ENSMUST00000221823 1078 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Polr1aO35134 Gm5053-201ENSMUST00000208361 1678 ntBASIC18.31■□□□□ 0.52
Polr1aO35134 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Polr1aO35134 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Polr1aO35134 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Polr1aO35134 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Polr1aO35134 Gm12194-201ENSMUST00000117756 1012 ntBASIC18.31■□□□□ 0.52
Polr1aO35134 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC18.31■□□□□ 0.52
Polr1aO35134 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC18.31■□□□□ 0.52
Polr1aO35134 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Polr1aO35134 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Polr1aO35134 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Gm28833-201ENSMUST00000189671 559 ntBASIC18.31■□□□□ 0.52
Polr1aO35134 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC18.31■□□□□ 0.52
Polr1aO35134 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Polr1aO35134 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr1aO35134 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Polr1aO35134 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Polr1aO35134 Gm15528-201ENSMUST00000117821 864 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 Gm13549-201ENSMUST00000118339 796 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 Gm11354-201ENSMUST00000121974 422 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Polr1aO35134 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC18.3■□□□□ 0.52
Polr1aO35134 Gm4895-201ENSMUST00000181646 1137 ntBASIC18.3■□□□□ 0.52
Polr1aO35134 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Polr1aO35134 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Polr1aO35134 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC18.3■□□□□ 0.52
Polr1aO35134 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Polr1aO35134 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Polr1aO35134 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Polr1aO35134 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm26982-201ENSMUST00000182250 1151 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm5621-201ENSMUST00000187303 640 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC18.29■□□□□ 0.52
Polr1aO35134 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Polr1aO35134 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Polr1aO35134 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm42748-201ENSMUST00000199354 2341 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Rab3c-202ENSMUST00000223922 2398 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm11500-201ENSMUST00000118237 601 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm24248-201ENSMUST00000157321 322 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm42599-201ENSMUST00000201308 469 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm18706-201ENSMUST00000210053 1066 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC18.29■□□□□ 0.52
Polr1aO35134 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr1aO35134 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Polr1aO35134 Gm44056-201ENSMUST00000204623 1427 ntBASIC18.29■□□□□ 0.52
Polr1aO35134 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms