Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm10731-201ENSMUST00000181171 448 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm18204-201ENSMUST00000209835 793 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm45594-201ENSMUST00000211717 241 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.62□□□□□ -0.07
NpcdF8VQB8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NpcdF8VQB8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.61□□□□□ -0.07
NpcdF8VQB8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm15566-201ENSMUST00000121130 590 ntBASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm3551-201ENSMUST00000190750 664 ntBASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Mt1-202ENSMUST00000211807 1085 ntBASIC14.61□□□□□ -0.07
NpcdF8VQB8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.61□□□□□ -0.07
NpcdF8VQB8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NpcdF8VQB8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm25063-201ENSMUST00000104666 94 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm12990-201ENSMUST00000120372 468 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm12783-201ENSMUST00000121425 397 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm4654-201ENSMUST00000183305 982 ntBASIC14.6□□□□□ -0.07
NpcdF8VQB8 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NpcdF8VQB8 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms