Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc188F6WEU2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm23612-201ENSMUST00000103823 110 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm13281-201ENSMUST00000120871 567 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm13827-201ENSMUST00000148801 372 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm26272-201ENSMUST00000179241 132 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm23576-201ENSMUST00000179918 110 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm9487-201ENSMUST00000216600 472 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm5449-201ENSMUST00000081132 357 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc188F6WEU2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gm23132-201ENSMUST00000104254 132 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gm23604-201ENSMUST00000104311 132 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Gm11244-201ENSMUST00000121243 237 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc188F6WEU2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms