Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm9996-201ENSMUST00000070359 913 ntBASIC12.25□□□□□ -0.45
Rrn3B2RS91 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.25□□□□□ -0.45
Rrn3B2RS91 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrn3B2RS91 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 AA914427-201ENSMUST00000193194 1166 ntBASIC12.24□□□□□ -0.45
Rrn3B2RS91 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gm42937-201ENSMUST00000197360 752 ntBASIC12.24□□□□□ -0.45
Rrn3B2RS91 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.24□□□□□ -0.45
Rrn3B2RS91 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.24□□□□□ -0.45
Rrn3B2RS91 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrn3B2RS91 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm14130-201ENSMUST00000118417 987 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm26361-201ENSMUST00000158868 186 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.23□□□□□ -0.45
Rrn3B2RS91 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms