Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd3B1AR17 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Chd3B1AR17 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.88□□□□□ -0.51
Chd3B1AR17 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd3B1AR17 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm16166-201ENSMUST00000118291 787 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm12501-201ENSMUST00000119163 529 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm11941-201ENSMUST00000119904 610 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.87□□□□□ -0.51
Chd3B1AR17 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm37986-201ENSMUST00000193285 383 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Mir7686-201ENSMUST00000200604 57 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.87□□□□□ -0.51
Chd3B1AR17 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.86□□□□□ -0.51
Chd3B1AR17 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.86□□□□□ -0.51
Chd3B1AR17 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Gm23085-201ENSMUST00000157849 293 ntBASIC11.86□□□□□ -0.51
Chd3B1AR17 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Mir6546-201ENSMUST00000184460 62 ntBASIC11.86□□□□□ -0.51
Chd3B1AR17 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.86□□□□□ -0.51
Chd3B1AR17 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd3B1AR17 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd3B1AR17 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm11509-201ENSMUST00000117358 325 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm13035-201ENSMUST00000117496 342 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm13809-201ENSMUST00000117921 597 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm3150-201ENSMUST00000166418 204 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm44124-201ENSMUST00000204159 472 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm44100-201ENSMUST00000204329 436 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm6905-201ENSMUST00000205729 511 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms