Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Speer3W4VSP1 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm8582-201ENSMUST00000164061 789 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm8810-201ENSMUST00000172895 754 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm18717-201ENSMUST00000192744 1241 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.61□□□□□ -0.39
Speer3W4VSP1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Speer3W4VSP1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm11803-201ENSMUST00000119966 444 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm7113-201ENSMUST00000120477 958 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm15937-201ENSMUST00000120727 1235 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm10156-201ENSMUST00000122364 462 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Proscos-202ENSMUST00000178990 666 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm8652-201ENSMUST00000181363 964 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm28693-202ENSMUST00000190758 331 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm5717-201ENSMUST00000198243 1062 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm8598-201ENSMUST00000221184 836 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm42822-201ENSMUST00000200507 1529 ntBASIC12.6□□□□□ -0.39
Speer3W4VSP1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms