Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm14017-201ENSMUST00000121934 386 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm16505-201ENSMUST00000179981 232 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm13097-201ENSMUST00000210722 397 ntBASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl40Q9Z2Q5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm14277-201ENSMUST00000121195 360 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm24990-201ENSMUST00000157406 323 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm38317-201ENSMUST00000195564 343 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Mir339-201ENSMUST00000083659 96 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl40Q9Z2Q5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mrpl40Q9Z2Q5 Gm12058-201ENSMUST00000118614 437 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms