Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm22334-201ENSMUST00000158070 133 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm13461-201ENSMUST00000120980 662 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Ginm1-202ENSMUST00000065124 300 ntBASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn8aQ9WTU3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm20426-201ENSMUST00000173657 440 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms