Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm10312-201ENSMUST00000078515 489 ntBASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Cog3-203ENSMUST00000227473 4197 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clcf1Q9QZM3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms