Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm14724-201ENSMUST00000118400 537 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm4482-201ENSMUST00000200876 742 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.43□□□□□ -0.1
Ube3bQ9ES34 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3bQ9ES34 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Gm13035-201ENSMUST00000117496 342 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Gm12036-201ENSMUST00000120008 530 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Mir6979-201ENSMUST00000183927 56 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3bQ9ES34 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms