Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Gm29649-201ENSMUST00000185649 419 ntBASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Gm5781-201ENSMUST00000219792 443 ntBASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snf8Q9CZ28 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm13342-201ENSMUST00000121055 207 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm5745-201ENSMUST00000183748 313 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm27682-201ENSMUST00000183930 110 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Gm39404-201ENSMUST00000216350 313 ntBASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Snf8Q9CZ28 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snf8Q9CZ28 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms