Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H2afb1Q9CQ70 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm6023-201ENSMUST00000118217 606 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm18711-201ENSMUST00000199341 750 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H2afb1Q9CQ70 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm13829-201ENSMUST00000119600 138 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm13316-201ENSMUST00000140537 691 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm28882-201ENSMUST00000185504 314 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm5370-201ENSMUST00000187187 574 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms