Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm25043-201ENSMUST00000158604 212 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm2991-201ENSMUST00000173338 480 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm6621-201ENSMUST00000193251 772 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Cts7-204ENSMUST00000225321 1257 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.15□□□□□ -0.46
Trim33Q99PP7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim33Q99PP7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim33Q99PP7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim33Q99PP7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim33Q99PP7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.14□□□□□ -0.47
Trim33Q99PP7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm26226-201ENSMUST00000082509 116 ntBASIC12.14□□□□□ -0.47
Trim33Q99PP7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim33Q99PP7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.13□□□□□ -0.47
Trim33Q99PP7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms