Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm9645-201ENSMUST00000197131 792 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac9Q99N13 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm15004-201ENSMUST00000119192 630 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm1848-201ENSMUST00000120711 789 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm37299-201ENSMUST00000193951 826 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm43186-201ENSMUST00000198130 824 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm18893-201ENSMUST00000198416 943 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm44980-201ENSMUST00000205826 314 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.27□□□□□ -0.13
Hdac9Q99N13 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac9Q99N13 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Rubie-203ENSMUST00000227803 2430 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm11949-201ENSMUST00000117640 372 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Mir1901-201ENSMUST00000122616 78 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm8492-201ENSMUST00000182375 987 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.26□□□□□ -0.13
Hdac9Q99N13 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms