Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12616-201ENSMUST00000118594 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm13408-201ENSMUST00000119822 798 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm13935-201ENSMUST00000121859 798 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12624-201ENSMUST00000177615 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12621-201ENSMUST00000177760 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12615-201ENSMUST00000177970 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12622-201ENSMUST00000177975 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12627-201ENSMUST00000178412 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12625-201ENSMUST00000179122 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12614-201ENSMUST00000179586 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm12613-201ENSMUST00000180323 382 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sh3rf2Q8BZT2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm24891-201ENSMUST00000104391 136 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm23085-201ENSMUST00000157849 293 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm9550-201ENSMUST00000161130 862 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm24514-201ENSMUST00000174961 285 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Gm8100-201ENSMUST00000182906 988 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Rubie-203ENSMUST00000227803 2430 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms