Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup54Q8BTS4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm15711-201ENSMUST00000118889 535 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm12380-201ENSMUST00000119012 544 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup54Q8BTS4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.41□□□□□ -0.42
Nup54Q8BTS4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup54Q8BTS4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms