Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm18062-201ENSMUST00000208020 547 ntBASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm6007-201ENSMUST00000208170 823 ntBASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm18055-201ENSMUST00000208254 547 ntBASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Gm14127-201ENSMUST00000117906 678 ntBASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Gm18584-201ENSMUST00000203098 964 ntBASIC11.74□□□□□ -0.53
Rnf38Q8BI21 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.74□□□□□ -0.53
Rnf38Q8BI21 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.74□□□□□ -0.53
Rnf38Q8BI21 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf38Q8BI21 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.73□□□□□ -0.53
Rnf38Q8BI21 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms