Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Gm6082-201ENSMUST00000215204 454 ntBASIC12.03□□□□□ -0.48
Ubp1Q811S7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.03□□□□□ -0.48
Ubp1Q811S7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubp1Q811S7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ubp1Q811S7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.02□□□□□ -0.49
Ubp1Q811S7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms