Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf38bQ80SY5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Map1b-203ENSMUST00000223725 2669 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Gm23153-201ENSMUST00000175323 313 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Gm37905-201ENSMUST00000195310 341 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Gm17812-201ENSMUST00000204935 318 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf38bQ80SY5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Gm32999-201ENSMUST00000192693 562 ntBASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Gm10312-201ENSMUST00000078515 489 ntBASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Daam2-202ENSMUST00000224595 1926 ntBASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf38bQ80SY5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms