Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh8Q7TSK3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm42997-202ENSMUST00000200321 985 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh8Q7TSK3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 AY036118-201ENSMUST00000200021 923 ntBASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh8Q7TSK3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms