Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm26013-201ENSMUST00000104404 119 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm15004-201ENSMUST00000119192 630 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm5419-201ENSMUST00000119301 527 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm13047-201ENSMUST00000117116 815 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm14247-201ENSMUST00000120950 237 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm23218-201ENSMUST00000158124 276 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms