Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm14109-201ENSMUST00000118814 309 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Gm19994-201ENSMUST00000217086 586 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc2Q6PDG5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm15276-201ENSMUST00000145953 498 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm25890-201ENSMUST00000177643 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm22614-201ENSMUST00000178300 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm22042-201ENSMUST00000082989 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Gm26110-201ENSMUST00000083971 165 ntBASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc2Q6PDG5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms