Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm11978-201ENSMUST00000122315 466 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm27390-201ENSMUST00000184516 176 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim80Q3V061 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm12203-201ENSMUST00000118235 598 ntBASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm12209-201ENSMUST00000120089 596 ntBASIC12.59□□□□□ -0.39
Trim80Q3V061 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm6458-201ENSMUST00000211573 635 ntBASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim80Q3V061 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim80Q3V061 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim80Q3V061 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.58□□□□□ -0.39
Trim80Q3V061 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim80Q3V061 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.58□□□□□ -0.4
Trim80Q3V061 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm26927-201ENSMUST00000182385 965 ntBASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm27682-201ENSMUST00000183930 110 ntBASIC12.58□□□□□ -0.4
Trim80Q3V061 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.58□□□□□ -0.4
Trim80Q3V061 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.58□□□□□ -0.4
Trim80Q3V061 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim80Q3V061 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms