Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Q3KNL4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Q3KNL4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.93□□□□□ -0.5
Q3KNL4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q3KNL4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Q3KNL4 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Q3KNL4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.92□□□□□ -0.5
Q3KNL4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Q3KNL4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Q3KNL4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Q3KNL4 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.92□□□□□ -0.5
Q3KNL4 Gm13736-201ENSMUST00000119272 253 ntBASIC11.92□□□□□ -0.5
Q3KNL4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Q3KNL4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.92□□□□□ -0.5
Q3KNL4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.92□□□□□ -0.5
Q3KNL4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.92□□□□□ -0.5
Q3KNL4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.92□□□□□ -0.5
Q3KNL4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.92□□□□□ -0.5
Q3KNL4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.92□□□□□ -0.5
Q3KNL4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Q3KNL4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Q3KNL4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Q3KNL4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Q3KNL4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.92□□□□□ -0.5
Q3KNL4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.91□□□□□ -0.5
Q3KNL4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Gm17150-201ENSMUST00000165577 381 ntBASIC11.91□□□□□ -0.5
Q3KNL4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.91□□□□□ -0.5
Q3KNL4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.91□□□□□ -0.5
Q3KNL4 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.91□□□□□ -0.5
Q3KNL4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.91□□□□□ -0.5
Q3KNL4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.91□□□□□ -0.5
Q3KNL4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3KNL4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q3KNL4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3KNL4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3KNL4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.9□□□□□ -0.5
Q3KNL4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3KNL4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3KNL4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.9□□□□□ -0.5
Q3KNL4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms