Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm37365-201ENSMUST00000193109 409 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm14021-201ENSMUST00000117683 961 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm14699-201ENSMUST00000122340 228 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm23432-201ENSMUST00000157181 131 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Gm38246-201ENSMUST00000194318 1511 ntBASIC10.82□□□□□ -0.68
Chd8Q09XV5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd8Q09XV5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd8Q09XV5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm11473-201ENSMUST00000118980 359 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm14048-201ENSMUST00000121864 1268 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm7805-201ENSMUST00000154348 448 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm16560-201ENSMUST00000159115 404 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm9162-201ENSMUST00000182081 991 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm44658-201ENSMUST00000207965 637 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Olfr584-201ENSMUST00000098210 964 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Mir1249-201ENSMUST00000116791 98 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm11660-201ENSMUST00000120955 412 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm4705-201ENSMUST00000177415 354 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm40332-201ENSMUST00000199847 938 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm18010-201ENSMUST00000203553 202 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.81□□□□□ -0.68
Chd8Q09XV5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms