Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm9630-201ENSMUST00000178304 885 ntBASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.42□□□□□ -0.9
Cdx4Q07424 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.42□□□□□ -0.9
Cdx4Q07424 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx4Q07424 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm15703-201ENSMUST00000120250 880 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm4857-201ENSMUST00000192718 785 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm31256-201ENSMUST00000194705 506 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm45925-201ENSMUST00000218882 744 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Mir433-201ENSMUST00000093564 124 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms