Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1sQ02789 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1sQ02789 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm24992-201ENSMUST00000157412 130 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Mir6953-201ENSMUST00000184745 68 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm42660-201ENSMUST00000197733 947 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm8111-201ENSMUST00000117659 987 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm14165-201ENSMUST00000121456 952 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Gm44814-201ENSMUST00000207018 434 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1sQ02789 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1sQ02789 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.99□□□□□ -0.01
Cacna1sQ02789 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 AC159810.1-201ENSMUST00000214838 1480 ntBASIC14.98□□□□□ -0.01
Cacna1sQ02789 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm13284-201ENSMUST00000121020 547 ntBASIC14.98□□□□□ -0.01
Cacna1sQ02789 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm16305-201ENSMUST00000140747 556 ntBASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm31274-201ENSMUST00000197356 229 ntBASIC14.98□□□□□ -0.01
Cacna1sQ02789 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1sQ02789 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms