Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm18304-201ENSMUST00000189162 546 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.15□□□□□ -0.78
Pdlim4P70271 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm38341-201ENSMUST00000195357 515 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm44958-201ENSMUST00000203734 736 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Pdlim4P70271 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Gm24136-201ENSMUST00000083374 165 ntBASIC10.15□□□□□ -0.78
Pdlim4P70271 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pdlim4P70271 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pdlim4P70271 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Pdlim4P70271 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Pdlim4P70271 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Pdlim4P70271 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Pdlim4P70271 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pdlim4P70271 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.14□□□□□ -0.79
Pdlim4P70271 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm25214-201ENSMUST00000104573 129 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Pdlim4P70271 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm14726-201ENSMUST00000120623 896 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm15547-201ENSMUST00000122152 333 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm28882-201ENSMUST00000185504 314 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.14□□□□□ -0.79
Pdlim4P70271 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.14□□□□□ -0.79
Pdlim4P70271 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pdlim4P70271 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms