Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.48□□□□□ -0.57
Nup43P59235 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.48□□□□□ -0.57
Nup43P59235 Gm13665-201ENSMUST00000120830 528 ntBASIC11.48□□□□□ -0.57
Nup43P59235 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.48□□□□□ -0.57
Nup43P59235 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Gm25700-201ENSMUST00000177693 110 ntBASIC11.48□□□□□ -0.57
Nup43P59235 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nup43P59235 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.48□□□□□ -0.57
Nup43P59235 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.48□□□□□ -0.57
Nup43P59235 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Nup43P59235 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.48□□□□□ -0.57
Nup43P59235 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nup43P59235 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.47□□□□□ -0.57
Nup43P59235 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nup43P59235 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Nup43P59235 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nup43P59235 Gm13296-201ENSMUST00000117854 997 ntBASIC11.47□□□□□ -0.57
Nup43P59235 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.47□□□□□ -0.57
Nup43P59235 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.47□□□□□ -0.57
Nup43P59235 Gm42599-201ENSMUST00000201308 469 ntBASIC11.47□□□□□ -0.57
Nup43P59235 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nup43P59235 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.47□□□□□ -0.57
Nup43P59235 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.47□□□□□ -0.57
Nup43P59235 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nup43P59235 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nup43P59235 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.47□□□□□ -0.57
Nup43P59235 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nup43P59235 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.47□□□□□ -0.57
Nup43P59235 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nup43P59235 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Nup43P59235 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nup43P59235 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.46□□□□□ -0.57
Nup43P59235 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.46□□□□□ -0.57
Nup43P59235 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.46□□□□□ -0.57
Nup43P59235 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.46□□□□□ -0.57
Nup43P59235 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.46□□□□□ -0.57
Nup43P59235 Gm26361-201ENSMUST00000158868 186 ntBASIC11.46□□□□□ -0.57
Nup43P59235 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.46□□□□□ -0.57
Nup43P59235 Gm21156-201ENSMUST00000189693 869 ntBASIC11.46□□□□□ -0.57
Nup43P59235 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.46□□□□□ -0.57
Nup43P59235 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.46□□□□□ -0.57
Nup43P59235 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.46□□□□□ -0.57
Nup43P59235 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nup43P59235 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms