Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdx1P52946 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pdx1P52946 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.01□□□□□ -0.49
Pdx1P52946 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdx1P52946 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12□□□□□ -0.49
Pdx1P52946 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pdx1P52946 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pdx1P52946 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Gm19692-201ENSMUST00000203856 2084 ntBASIC12□□□□□ -0.49
Pdx1P52946 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12□□□□□ -0.49
Pdx1P52946 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdx1P52946 Gm12164-201ENSMUST00000121695 551 ntBASIC12□□□□□ -0.49
Pdx1P52946 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pdx1P52946 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12□□□□□ -0.49
Pdx1P52946 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Gm45598-202ENSMUST00000210719 986 ntBASIC12□□□□□ -0.49
Pdx1P52946 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Pdx1P52946 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdx1P52946 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Gm44241-201ENSMUST00000203230 1662 ntBASIC12□□□□□ -0.49
Pdx1P52946 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pdx1P52946 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdx1P52946 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm25668-201ENSMUST00000157700 129 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm26083-201ENSMUST00000157904 193 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdx1P52946 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm25890-201ENSMUST00000177643 165 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm22614-201ENSMUST00000178300 165 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdx1P52946 Rprl1-202ENSMUST00000198476 238 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm44651-201ENSMUST00000207343 372 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdx1P52946 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdx1P52946 Gm22042-201ENSMUST00000082989 165 ntBASIC11.99□□□□□ -0.49
Pdx1P52946 Gm26110-201ENSMUST00000083971 165 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms