Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.68□□□□□ -0.54
Prox1P48437 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Prox1P48437 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Prox1P48437 Gm17150-201ENSMUST00000165577 381 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.68□□□□□ -0.54
Prox1P48437 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.68□□□□□ -0.54
Prox1P48437 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.68□□□□□ -0.54
Prox1P48437 Gm6266-201ENSMUST00000203844 806 ntBASIC11.68□□□□□ -0.54
Prox1P48437 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.68□□□□□ -0.54
Prox1P48437 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.68□□□□□ -0.54
Prox1P48437 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.68□□□□□ -0.54
Prox1P48437 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.68□□□□□ -0.54
Prox1P48437 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prox1P48437 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Prox1P48437 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.67□□□□□ -0.54
Prox1P48437 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Prox1P48437 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.67□□□□□ -0.54
Prox1P48437 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.67□□□□□ -0.54
Prox1P48437 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.67□□□□□ -0.54
Prox1P48437 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.67□□□□□ -0.54
Prox1P48437 Gm37497-201ENSMUST00000195830 798 ntBASIC11.67□□□□□ -0.54
Prox1P48437 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.67□□□□□ -0.54
Prox1P48437 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.67□□□□□ -0.54
Prox1P48437 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Prox1P48437 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.67□□□□□ -0.54
Prox1P48437 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Prox1P48437 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Prox1P48437 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Prox1P48437 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.66□□□□□ -0.54
Prox1P48437 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Prox1P48437 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prox1P48437 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.66□□□□□ -0.54
Prox1P48437 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.66□□□□□ -0.54
Prox1P48437 Gm12203-201ENSMUST00000118235 598 ntBASIC11.66□□□□□ -0.54
Prox1P48437 Gm13369-201ENSMUST00000119442 987 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms