Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm6180-201ENSMUST00000065243 498 ntBASIC9.98□□□□□ -0.81
VhlP40338 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
VhlP40338 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
VhlP40338 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.98□□□□□ -0.81
VhlP40338 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
VhlP40338 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VhlP40338 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.97□□□□□ -0.81
VhlP40338 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Gm24830-201ENSMUST00000102024 166 ntBASIC9.97□□□□□ -0.81
VhlP40338 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VhlP40338 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm11918-201ENSMUST00000121660 179 ntBASIC9.97□□□□□ -0.81
VhlP40338 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.97□□□□□ -0.81
VhlP40338 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.97□□□□□ -0.81
VhlP40338 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.97□□□□□ -0.81
VhlP40338 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VhlP40338 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.97□□□□□ -0.81
VhlP40338 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.97□□□□□ -0.81
VhlP40338 Gm9908-201ENSMUST00000211534 448 ntBASIC9.97□□□□□ -0.81
VhlP40338 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.97□□□□□ -0.81
VhlP40338 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.97□□□□□ -0.81
VhlP40338 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm26232-201ENSMUST00000083360 166 ntBASIC9.97□□□□□ -0.81
VhlP40338 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.97□□□□□ -0.81
VhlP40338 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.97□□□□□ -0.81
VhlP40338 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.97□□□□□ -0.81
VhlP40338 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.97□□□□□ -0.81
VhlP40338 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.97□□□□□ -0.81
VhlP40338 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.97□□□□□ -0.81
VhlP40338 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.97□□□□□ -0.81
VhlP40338 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VhlP40338 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.96□□□□□ -0.81
VhlP40338 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.96□□□□□ -0.81
VhlP40338 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.96□□□□□ -0.81
VhlP40338 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VhlP40338 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VhlP40338 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.96□□□□□ -0.82
VhlP40338 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VhlP40338 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.96□□□□□ -0.82
VhlP40338 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
VhlP40338 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VhlP40338 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.96□□□□□ -0.82
VhlP40338 Gm24196-201ENSMUST00000179161 110 ntBASIC9.96□□□□□ -0.82
VhlP40338 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.96□□□□□ -0.82
VhlP40338 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.96□□□□□ -0.82
VhlP40338 Gm9794-201ENSMUST00000202370 423 ntBASIC9.96□□□□□ -0.82
VhlP40338 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
VhlP40338 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms