Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.48□□□□□ -0.57
TP20293 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TP20293 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TP20293 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TP20293 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.48□□□□□ -0.57
TP20293 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TP20293 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TP20293 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.47□□□□□ -0.57
TP20293 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.47□□□□□ -0.57
TP20293 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.47□□□□□ -0.57
TP20293 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.47□□□□□ -0.57
TP20293 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.47□□□□□ -0.57
TP20293 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.47□□□□□ -0.57
TP20293 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.47□□□□□ -0.57
TP20293 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.47□□□□□ -0.57
TP20293 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.47□□□□□ -0.57
TP20293 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.47□□□□□ -0.57
TP20293 Gm6007-201ENSMUST00000208170 823 ntBASIC11.47□□□□□ -0.57
TP20293 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.47□□□□□ -0.57
TP20293 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.47□□□□□ -0.57
TP20293 Gm5950-201ENSMUST00000213337 772 ntBASIC11.47□□□□□ -0.57
TP20293 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.47□□□□□ -0.57
TP20293 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.47□□□□□ -0.57
TP20293 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.47□□□□□ -0.57
TP20293 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TP20293 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TP20293 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.46□□□□□ -0.57
TP20293 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.46□□□□□ -0.57
TP20293 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Gm14999-201ENSMUST00000121039 624 ntBASIC11.46□□□□□ -0.57
TP20293 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.46□□□□□ -0.57
TP20293 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.46□□□□□ -0.57
TP20293 Gm23119-201ENSMUST00000158610 140 ntBASIC11.46□□□□□ -0.57
TP20293 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.46□□□□□ -0.57
TP20293 Mir8109-201ENSMUST00000184375 117 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms