Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Trbv27-201ENSMUST00000193711 277 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm4803-201ENSMUST00000218729 1279 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm8712-201ENSMUST00000221090 701 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Mir433-201ENSMUST00000093564 124 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm12314-201ENSMUST00000118104 538 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm14791-201ENSMUST00000119061 1166 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm15719-201ENSMUST00000120619 635 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm25843-201ENSMUST00000122582 314 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm8185-201ENSMUST00000160999 669 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm29199-201ENSMUST00000187766 775 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm38317-201ENSMUST00000195564 343 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm39404-201ENSMUST00000216350 313 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.65□□□□□ -0.86
Hoxd3P09027 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 AC154245.1-201ENSMUST00000224615 601 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm10312-201ENSMUST00000078515 489 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxd3P09027 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.65□□□□□ -0.86
Hoxd3P09027 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hoxd3P09027 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms