Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.5□□□□□ -0.57
ApoeP08226 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm24830-201ENSMUST00000102024 166 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Gm12314-201ENSMUST00000118104 538 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.49□□□□□ -0.57
ApoeP08226 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.49□□□□□ -0.57
ApoeP08226 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
ApoeP08226 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.49□□□□□ -0.57
ApoeP08226 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.49□□□□□ -0.57
ApoeP08226 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.49□□□□□ -0.57
ApoeP08226 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.49□□□□□ -0.57
ApoeP08226 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.49□□□□□ -0.57
ApoeP08226 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm26232-201ENSMUST00000083360 166 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.49□□□□□ -0.57
ApoeP08226 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ApoeP08226 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.49□□□□□ -0.57
ApoeP08226 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.48□□□□□ -0.57
ApoeP08226 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Gm15920-201ENSMUST00000118998 402 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.48□□□□□ -0.57
ApoeP08226 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
ApoeP08226 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.48□□□□□ -0.57
ApoeP08226 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.48□□□□□ -0.57
ApoeP08226 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ApoeP08226 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms