Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.67□□□□□ -0.7
P04224 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.67□□□□□ -0.7
P04224 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04224 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04224 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.66□□□□□ -0.7
P04224 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.66□□□□□ -0.7
P04224 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.66□□□□□ -0.7
P04224 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
P04224 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P04224 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
P04224 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P04224 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P04224 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Gm5687-201ENSMUST00000118252 640 ntBASIC10.66□□□□□ -0.7
P04224 Gm15920-201ENSMUST00000118998 402 ntBASIC10.66□□□□□ -0.7
P04224 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.66□□□□□ -0.7
P04224 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.66□□□□□ -0.7
P04224 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.66□□□□□ -0.7
P04224 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P04224 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.66□□□□□ -0.7
P04224 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.66□□□□□ -0.7
P04224 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P04224 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.66□□□□□ -0.7
P04224 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.66□□□□□ -0.7
P04224 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
P04224 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04224 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P04224 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.65□□□□□ -0.7
P04224 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
P04224 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.65□□□□□ -0.7
P04224 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
P04224 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.65□□□□□ -0.7
P04224 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
P04224 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.65□□□□□ -0.7
P04224 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04224 Mir7654-201ENSMUST00000185082 70 ntBASIC10.65□□□□□ -0.7
P04224 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
P04224 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.65□□□□□ -0.7
P04224 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.65□□□□□ -0.7
P04224 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.65□□□□□ -0.7
P04224 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.65□□□□□ -0.7
P04224 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.65□□□□□ -0.7
P04224 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.65□□□□□ -0.7
P04224 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.65□□□□□ -0.7
P04224 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.65□□□□□ -0.7
P04224 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms